deep-agents-core

INVOKE THIS SKILL when building ANY Deep Agents application. Covers create_deep_agent(), harness architecture, SKILL.md format, and configuration options.

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UpdatedOct 05, 2026normalized snapshot

SKILL.md

  • Task Planning: TodoListMiddleware for breaking down complex tasks
  • Context Management: Filesystem tools with pluggable backends
  • Task Delegation: SubAgent middleware for spawning specialized agents
  • Long-term Memory: Persistent storage across threads via Store
  • Human-in-the-loop: Approval workflows for sensitive operations
  • Skills: On-demand loading of specialized capabilities

The agent harness provides these capabilities automatically - you configure, not implement.

Use Deep Agents WhenUse LangChain's create_agent When
Multi-step tasks requiring planningSimple, single-purpose tasks
Large context requiring file managementContext fits in a single prompt
Need for specialized subagentsSingle agent is sufficient
Persistent memory across sessionsEphemeral, single-session work
If you need to...MiddlewareNotes
Track complex tasksTodoListMiddlewareDefault enabled
Manage file contextFilesystemMiddlewareConfigure backend
Delegate workSubAgentMiddlewareAdd custom subagents
Add human approvalHumanInTheLoopMiddlewareRequires checkpointer
Load skillsSkillsMiddlewareProvide skill directories
Access memoryMemoryMiddlewareRequires Store instance
from deepagents import create_deep_agent
from langchain.tools import tool

@tool
def get_weather(city: str) -> str:
    """Get the weather for a given city."""
    return f"It is always sunny in {city}"

agent = create_deep_agent(
    model="claude-sonnet-4-5-20250929",
    tools=[get_weather],
    system_prompt="You are a helpful assistant"
)

config = {"configurable": {"thread_id": "user-123"}}
result = agent.invoke({
    "messages": [{"role": "user", "content": "What's the weather in Tokyo?"}]
}, config=config)
import { createDeepAgent } from "deepagents";
import { tool } from "@langchain/core/tools";
import { z } from "zod";

const getWeather = tool(
  async ({ city }) => `It is always sunny in ${city}`,
  { name: "get_weather", description: "Get weather for a city", schema: z.object({ city: z.string() }) }
);

const agent = await createDeepAgent({
  model: "claude-sonnet-4-5-20250929",
  tools: [getWeather],
  systemPrompt: "You are a helpful assistant"
});

const config = { configurable: { thread_id: "user-123" } };
const result = await agent.invoke({
  messages: [{ role: "user", content: "What's the weather in Tokyo?" }]
}, config);
from deepagents import create_deep_agent
from deepagents.backends import FilesystemBackend
from langgraph.checkpoint.memory import MemorySaver
from langgraph.store.memory import InMemoryStore

agent = create_deep_agent(
    name="my-assistant",
    model="claude-sonnet-4-5-20250929",
    tools=[custom_tool1, custom_tool2],
    system_prompt="Custom instructions",
    subagents=[research_agent, code_agent],
    backend=FilesystemBackend(root_dir=".", virtual_mode=True),
    interrupt_on={"write_file": True},
    skills=["./skills/"],
    checkpointer=MemorySaver(),
    store=InMemoryStore()
)
import { createDeepAgent, FilesystemBackend } from "deepagents";
import { MemorySaver, InMemoryStore } from "@langchain/langgraph";

const agent = await createDeepAgent({
  name: "my-assistant",
  model: "claude-sonnet-4-5-20250929",
  tools: [customTool1, customTool2],
  systemPrompt: "Custom instructions",
  subagents: [researchAgent, codeAgent],
  backend: new FilesystemBackend({ rootDir: ".", virtualMode: true }),
  interruptOn: { write_file: true },
  skills: ["./skills/"],
  checkpointer: new MemorySaver(),
  store: new InMemoryStore()
});
  1. Planning: write_todos - Track multi-step tasks
  2. Filesystem: ls, read_file, write_file, edit_file, glob, grep
  3. Delegation: task - Spawn specialized subagents

SKILL.md Format

Directory Structure

skills/
└── my-skill/
    ├── SKILL.md        # Required: main skill file
    ├── examples.py     # Optional: supporting files
    └── templates/      # Optional: templates

SKILL.md Format

---
name: my-skill
description: Clear, specific description of what this skill does
---

# Skill Name

## Overview
Brief explanation of the skill's purpose.

## When to Use
Conditions when this skill applies.

## Instructions
Step-by-step guidance for the agent.
SkillsMemory (AGENTS.md)
On-demand loadingAlways loaded at startup
Task-specific instructionsGeneral preferences
Large documentationCompact context
SKILL.md in directoriesSingle AGENTS.md file
from deepagents import create_deep_agent
from deepagents.backends import FilesystemBackend
from langgraph.checkpoint.memory import MemorySaver

agent = create_deep_agent(
    backend=FilesystemBackend(root_dir=".", virtual_mode=True),
    skills=["./skills/"],
    checkpointer=MemorySaver()
)

result = agent.invoke({
    "messages": [{"role": "user", "content": "Use the python-testing skill"}]
}, config={"configurable": {"thread_id": "session-1"}})
import { createDeepAgent, FilesystemBackend } from "deepagents";
import { MemorySaver } from "@langchain/langgraph";

const agent = await createDeepAgent({
  backend: new FilesystemBackend({ rootDir: ".", virtualMode: true }),
  skills: ["./skills/"],
  checkpointer: new MemorySaver()
});

const result = await agent.invoke({
  messages: [{ role: "user", content: "Use the python-testing skill" }]
}, { configurable: { thread_id: "session-1" } });
from deepagents import create_deep_agent
from deepagents.backends import StoreBackend
from deepagents.backends.utils import create_file_data
from langgraph.store.memory import InMemoryStore

store = InMemoryStore()

# Load skill content into store
skill_content = """---
name: python-testing
description: Best practices for Python testing with pytest
---
# Python Testing Skill
..."""

store.put(
    namespace=("filesystem",),
    key="/skills/python-testing/SKILL.md",
    value=create_file_data(skill_content)
)

agent = create_deep_agent(
    backend=lambda rt: StoreBackend(rt),
    store=store,
    skills=["/skills/"]
)

What Agents CAN Configure

  • Model selection and parameters
  • Additional custom tools
  • System prompt customization
  • Backend storage strategy
  • Which tools require approval
  • Custom subagents with specialized tools

What Agents CANNOT Configure

  • Core middleware removal (TodoList, Filesystem, SubAgent always present)
  • The write_todos, task, or filesystem tool names
  • The SKILL.md frontmatter format
# WRONG
agent = create_deep_agent(interrupt_on={"write_file": True})

# CORRECT
agent = create_deep_agent(interrupt_on={"write_file": True}, checkpointer=MemorySaver())
// WRONG
const agent = await createDeepAgent({ interruptOn: { write_file: true } });

// CORRECT
const agent = await createDeepAgent({ interruptOn: { write_file: true }, checkpointer: new MemorySaver() });
# WRONG
agent = create_deep_agent(backend=lambda rt: StoreBackend(rt))

# CORRECT
agent = create_deep_agent(backend=lambda rt: StoreBackend(rt), store=InMemoryStore())
// WRONG
const agent = await createDeepAgent({ backend: (config) => new StoreBackend(config) });

// CORRECT
const agent = await createDeepAgent({ backend: (config) => new StoreBackend(config), store: new InMemoryStore() });
# WRONG: Each invocation is isolated
agent.invoke({"messages": [{"role": "user", "content": "Hi"}]})
agent.invoke({"messages": [{"role": "user", "content": "What did I say?"}]})

# CORRECT
config = {"configurable": {"thread_id": "user-123"}}
agent.invoke({"messages": [...]}, config=config)
agent.invoke({"messages": [...]}, config=config)
// WRONG: Each invocation is isolated
await agent.invoke({ messages: [{ role: "user", content: "Hi" }] });
await agent.invoke({ messages: [{ role: "user", content: "What did I say?" }] });

// CORRECT
const config = { configurable: { thread_id: "user-123" } };
await agent.invoke({ messages: [...] }, config);
await agent.invoke({ messages: [...] }, config);
# WRONG: Missing frontmatter in SKILL.md
# My Skill
This is my skill...

# CORRECT: Include YAML frontmatter
---
name: my-skill
description: Python testing best practices with pytest fixtures and mocking
---
# My Skill
This is my skill...
# WRONG: Skills won't load without proper backend
agent = create_deep_agent(skills=["./skills/"])

# CORRECT: Use FilesystemBackend for local skills
agent = create_deep_agent(
    backend=FilesystemBackend(root_dir=".", virtual_mode=True),
    skills=["./skills/"]
)
# WRONG: Vague description
---
name: helper
description: Helpful skill
---

# CORRECT: Specific description
---
name: python-testing
description: Python testing best practices with pytest fixtures, mocking, and async patterns
---
# WRONG: Custom subagents don't inherit skills
agent = create_deep_agent(
    skills=["/main-skills/"],
    subagents=[{"name": "helper", ...}]  # No skills
)

# CORRECT: Provide skills explicitly
agent = create_deep_agent(
    skills=["/main-skills/"],
    subagents=[{"name": "helper", "skills": ["/helper-skills/"], ...}]
)